Cmo-MIR171b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   -TT    T   C   CT         C       C      CGA  C     A  ACAATT  G    CG      C
 GC   GAAA AGT GTT  GATATTGGC CGGTTCA TCAGAT   TA CTACA GT      AC CTAT  ATATGT 
 ||   |||| ||| |||  ||||||||| ||||||| ||||||   || ||||| ||      || ||||  |||||| G
 TG   CTTT TCG CGA  CTATAACCG GCCGAGT AGTCTG   GT GATGT CA      TG GGTG  TGTACG 
T  CTT    C   T   TT         C       T      --A  C     -  --AATT  -    -A      T

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_023067629.1 0.0 NA NA
XM_023087272.1 0.0 NA NA
XM_023103388.1 0.0 NA NA
XM_023108702.1 0.0 NA NA
XM_023092290.1 1.5 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference