Cmo-MIR171c

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
        C  AAATC      C          A         T  A  -  A        AG
     ATA GA     CGAAAG GATGTTGGTG GGTTCAATC GA GA CG ATTTCACA  
     ||| ||     |||||| |||||||||| ||||||||| || || || ||||||||  G
     TGT CT     GTTTTC CTATAACCGC CCGAGTTAG CT CT GC TGAAGTGT  
CTCGT   A  ---AT      A          G         T  -  A  A        CA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_023067629.1 0.0 NA NA
XM_023087272.1 0.0 NA NA
XM_023103388.1 0.0 NA NA
XM_023108702.1 0.0 NA NA
XM_023092290.1 1.5 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference