Cmo-MIR171d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   GCT         - GGTCT       A C       C      -    ACCT    ACC    G            TAGT
      TGAAATAGC C     GATATTG C CGGTTCA TCAGAT CAGT    GTTT   AGCT CACGACATGCAC    
      ||||||||| |     ||||||| | ||||||| |||||| ||||    ||||   |||| ||||||||||||    T
      ACTTTATCG G     CTATAAC G GCCGAGT AGTCTA GTCG    CGAA   TTGG GTGCTGTACGTG    
GTATAT         T --ACT       C C       T      A    -ATT    ATT    -            CTTA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_023067629.1 0.0 NA NA
XM_023087272.1 0.0 NA NA
XM_023103388.1 0.0 NA NA
XM_023108702.1 0.0 NA NA
XM_023092290.1 1.5 2 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference