Egu-MIR171a

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
     ATTAGA    C   CGAC        A               C    CT     G
           CTTG AAC    GATGTTGG ATGGCTCAATCAAAT AAAA  CCTGA 
           |||| |||    |||||||| ||||||||||||||| ||||  ||||| A
           GGAC TTG    CTATAACC TGCCGAGTTAGTTTG TTTT  GGGCT 
TATAGATTAAA    -   --TA        G               A    CT     A

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XR_001173752.1 0.0 NA NA
XM_012988114.1 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference