Egu-MIR171d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  ACTCGAGGCAA    T A                       A     TT     -  AT
             GGTA G GATATTGGTGCGGTTCAATTAGA AGCCG  GCTCT GT  
             |||| | ||||||||||||||||||||||| |||||  ||||| ||  A
             TCAT C CTATAACCGTGCCGAGTTAGTTT TTGGC  CGAGA CG  
ACGTATAGTGTTA    T A                       A     -T     A  AT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XR_001173752.1 0.0 NA NA
XM_012988114.1 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference