Egu-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GTT     TA T    AT         T   G   C     ----TGT          -  A  CTA
     TGAAA  G CACT  GATGTTGGC CGG TCA TCAGA       GACGAACTTT AC CG   
     |||||  | ||||  ||||||||| ||| ||| |||||       |||||||||| || ||    
     ACTTT  C GTGA  CTATAACCG GCC AGT AGTCT       TTGCTTGAGA TG GT   
TGTTC     TA C    CT         T   G   T     TTGCTTT          A  -  TTT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XR_001173752.1 0.0 NA NA
XM_012988114.1 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference