Egu-MIR171f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GTTGGGTAAATTAA   A  C          A         C  A  -  -GG      C  GA
                AGA AG GATGTTGGTG GGTTCAATC GA GA CG   TTTACA AT  
                ||| || |||||||||| ||||||||| || || ||   |||||| ||   
                TCT TC CTATAACCGC CCGAGTTAG CT CT GC   AAATGT TG  
TCTTACTCTATATATC   C  A          G         A  -  A  AAG      T  GA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_012988114.1 1.0 NA NA
XM_012992433.1 1.0 NA NA
XR_001173752.1 1.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference