Fsy-MIR171a

Basic info.

• miRNA locus ID
• Fsy-MIR171a

• miRNA locus accession
• PmiREN005762

• Organism
• Fagus sylvatica

• Genomic location
• Fsy-OFEG01000187.1  214906  215043  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

     T     T   T              C       C     -  TA  TAT      AGACAAAA   TT
   TC TGAAA AGT ACTGTGATATTGGC CGGTTCA TCAGA AC  AG   GCATGA        AGC  
   || ||||| ||| |||||||||||||| ||||||| ||||| ||  ||   ||||||        |||   
   AG ACTTT TCA TGATACTATAACCG GCCGAGT AGTTT TG  TC   CGTGCT        TCG  
TTT  T     C   -              C       T     C  TG  ---      GATATATA   AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference