Fsy-MIR171c

Basic info.

• miRNA locus ID
• Fsy-MIR171c

• miRNA locus accession
• PmiREN005764

• Organism
• Fagus sylvatica

• Genomic location
• Fsy-OFEG01000051.1  152597  152708  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   T       T   T   TT         C       C      -     T     GA
    AGTGAAA GGT ACT  GATATTGGC TGGTTCA TCAGAA CAAAA AATGG  
    ||||||| ||| |||  ||||||||| ||||||| |||||| ||||| |||||   
    TTACTTT TCG TGA  CTATAACCG GCCGAGT AGTTTT GTTTT TTACT  
TTCT       C   -   CT         T       T      A     -     GT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference