Fsy-MIR171d

Basic info.

• miRNA locus ID
• Fsy-MIR171d

• miRNA locus accession
• PmiREN005765

• Organism
• Fagus sylvatica

• Genomic location
• Fsy-OFEG01000054.1  338209  338324  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  AAT   T    TT    G         C         A     T   T    TTAAT
     GGA CAGT  AACG GATATTGGT CGGTTCAAT AGAAA CAG GTTC     
     ||| ||||  |||| ||||||||| ||||||||| ||||| ||| ||||      
     CCT GTCA  TTGC CTATAACCG GCCGAGTTA TTTTT GTC CGAG     
TAAAC   C    CC    A         T         G     C   C    TTTTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference