Fsy-MIR171e

Basic info.

• miRNA locus ID
• Fsy-MIR171e

• miRNA locus accession
• PmiREN005766

• Organism
• Fagus sylvatica

• Genomic location
• Fsy-OFEG01000750.1  144120  144232  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

ATACT        ---T   ----                      A  C    CT     T
     TGGTGTAG    TCA    TGATGTTGGCATGGCTCAATCA AT AAAG  CTCAA 
     ||||||||    |||    |||||||||||||||||||||| || ||||  ||||| G
     ACTATATC    AGT    ACTATAACCGTGCCGAGTTAGT TA TTTC  GGGTT 
             TCTT   TTAT                      C  A    CT     G

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference