Fve-MIR171d

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
TTGTTTT     ----  -      ----         A                   TCT   AAG
       GATGA    GA AATGTA    TGATGTTGG ATGGCTCAATCAAATCAAA   CCC   
       |||||    || ||||||    ||||||||| |||||||||||||||||||   |||   A
       CTACT    CT TTACAT    ACTATAACC TGCCGAGTTAGTTTAGTTT   GGG   
            TCAC  A      TGAC         G                   CCT   CTA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

gene37887-v2.0.a2-hybrid.t2 0.0 NA NA
gene03956-v1.0-hybrid.t1 1.5 NA NA
gene04246-v1.0-hybrid.t1 1.5 NA NA
gene31749-v1.0-hybrid.t1 1.5 NA NA
gene11137-v1.0-hybrid.t1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference