Fan-MIR171c

Basic info.

• miRNA locus ID
• Fan-MIR171c

• miRNA locus accession
• PmiREN006197

• Organism
• Fragaria ananassa

• Genomic location
• Fan-BATT01645371.1  214  429  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

         CCAC    ATT   CTCA             C      ACTTTCTTAAATAATTGCTTCTACCCTTTCGATT    TTAGTTCCTCTATGACTTCATAGCTAGATTTCAGTGCGTAGTTTATAC
             GTAA   GAT    GATTGAGCCGCGC AATATC                                  GCTA                                                
             ||||   |||    ||||||||||||| ||||||                                  ||||                                                T
             CGTT   CTG    TTAACTCGGTGTG TTATAG                                  TACG                                                
TATACCAACTATA    ---   ----             -      ----------------------------------    TCTTTCACCGTATTTTATCGTTACGTTCGATCGACTTCGATTTATACT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference