Fan-MIR171d

Basic info.

• miRNA locus ID
• Fan-MIR171d

• miRNA locus accession
• PmiREN006198

• Organism
• Fragaria ananassa

• Genomic location
• Fan-BATT01122266.1  671  789  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TTGTTTC     ----  -      ----         A                   TCT   AAG
       GATGA    GA AATGTA    TGATGTTGG ATGGCTCAATCAAATCAAA   CCC   
       |||||    || ||||||    ||||||||| |||||||||||||||||||   |||   A
       CTACT    CT TTACAT    ACTATAACC TGCCGAGTTAGTTTAGTTT   GGG   
            TCAC  A      TGAC         G                   CCT   CTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference