Fan-MIR171e

Basic info.

• miRNA locus ID
• Fan-MIR171e

• miRNA locus accession
• PmiREN006199

• Organism
• Fragaria ananassa

• Genomic location
• Fan-DF300524.1  482  601  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

      GAGTTT    CT TAAC   A                       AAC   CT     CT
            GCTG  T    ATG GATATTGGTGCGGTTCAATCAGA   CAG  CTTTG  
            ||||  |    ||| |||||||||||||||||||||||   |||  |||||   
            CGAC  A    TAC CTATAACCGTGCCGAGTTAGTTT   GTC  GAAAT  
CCTACTAGTCTT    AT ----   A                       ATT   TT     TC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference