Fex-MIR171a

Basic info.

• miRNA locus ID
• Fex-MIR171a

• miRNA locus accession
• PmiREN006496

• Organism
• Fraxinus excelsior

• Genomic location
• Fex-FTPI01089058.1  361  499  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

 ACT     T   -     T         T       C     A  CAA  A   -      C        GA
    TGAAA AGT CACTG GATGTTGGC CGGCTCA TCAGA GT   GT TAA CATAAA CTTGTGTC  
    ||||| ||| ||||| ||||||||| ||||||| ||||| ||   || ||| |||||| ||||||||   
    ACTTT TCG GTGAT CTATAACCG GCCGAGT AGTTT CG   TA ATT GTATTT GAATGTAG  
ATTT     T   T     T         C       T     G  ---  -   A      A        AA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference