Fex-MIR171b

Basic info.

• miRNA locus ID
• Fex-MIR171b

• miRNA locus accession
• PmiREN006497

• Organism
• Fraxinus excelsior

• Genomic location
• Fex-FTPI01001336.1  148648  148762  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

    --     -    TAATG          AC A            C    TTC     A
  CA  GTGAC TGGC     ATGATGTTGG  C GCTCAATCAAAT AAAT   CCAAA 
  ||  ||||| ||||     ||||||||||  | |||||||||||| ||||   ||||| G
  GT  CATTG ACCG     TGCTATAACC  G CGAGTTAGTTTG TTTG   GGTTT 
TA  TG     T    ---TA          GT C            A    TTA     A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference