Fex-MIR171c

Basic info.

• miRNA locus ID
• Fex-MIR171c

• miRNA locus accession
• PmiREN006498

• Organism
• Fraxinus excelsior

• Genomic location
• Fex-FTPI01002750.1  81659  81774  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

T    TT   ---CA     G      A                A     T     TTAT
 CAGT  TAG     ATACG GATATT GTGCGGTTCAATTAGA AGCTG GCTCT    
 ||||  |||     ||||| |||||| |||||||||||||||| ||||| |||||     
 GTCA  ATC     TATGC CTATAA CGTGCCGAGTTAGTTT TTGAC CGAGA    
     TC   ATATG     A      C                A     T     TTGA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference