Fex-MIR171d

Basic info.

• miRNA locus ID
• Fex-MIR171d

• miRNA locus accession
• PmiREN006499

• Organism
• Fraxinus excelsior

• Genomic location
• Fex-FTPI01004882.1  53715  53815  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

    C       C  T    AT         C               TTAATT
     ATGGAAA AG AACA  GATATTGGC TGGTTCAATCAGATT      
     ||||||| || ||||  ||||||||| |||||||||||||||      T
     TACTTTT TC TTGT  CTATAACCG GCCGAGTTAGTTTAG      
TACCT       -  -    CT         T               TAATAT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference