Fex-MIR171e

Basic info.

• miRNA locus ID
• Fex-MIR171e

• miRNA locus accession
• PmiREN006605

• Organism
• Fraxinus excelsior

• Genomic location
• Fex-FTPI01003367.1  103513  103628  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TCAGTTTTAGCAATACGGGA    A                A   C T     TTAT
                      TATT GTGCGGTTCAATTAGA AGC G GCTCT    
                      |||| |||||||||||||||| ||| | |||||     
                      ATAA CGTGCCGAGTTAGTTT TTG C CGAGA    
GTCATCATCGTGTGCATGCACT    C                A   A T     TTTA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference