Gma-MIR171i

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
      -       CCG   CAA  G         C         A        AT      AAT
   GTA GAGGGGA   GTT   CG GATATTGGT CGGTTCAAT AGAAAGCA  GCTCAA   
   ||| |||||||   |||   || ||||||||| ||||||||| ||||||||  ||||||   G
   CAT CTTCTCT   CAA   GC CTATAACCG GCCGAGTTA TTTTTTGT  TGGGTT   
CCC   A       TCA   --A  A         T         C        CC      ATT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Glyma.20G199000.1 NA NA 0 (1)
Glyma.02G167700.1 NA NA 2 (1)
Glyma.05G245100.2 NA NA 2 (1)
Glyma.08G054900.1 NA NA 2 (2)
Glyma.10G190000.1 NA NA 2 (1)
Glyma.14G211100.1 NA NA 2 (1)
Glyma.11G168219.1 1.5 NA 3 (1)
Glyma.04G251900.1 2.0 NA 4 (1)
Glyma.06G110800.1 2.0 NA 4 (1)
Glyma.01G079500.1 1.5 NA NA
Glyma.01G136300.1 1.5 NA NA
Glyma.03G031800.1 1.5 NA NA
Glyma.06G132200.2 1.5 NA NA
Glyma.01G177200.1 2.0 NA NA
Glyma.10G261600.1 2.0 NA NA
Glyma.11G065200.1 2.0 2 NA
Glyma.13G204500.1 2.0 NA NA
Glyma.15G108100.4 2.0 NA NA
Glyma.20G129200.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference