Gma-MIR171m

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GTTGTAT    CA   ATCA             C       T   -G        AAGATG
         GAAG  CAA    AGGTATTGGCGTG CTCAATT GAA  ACATGGTT      
         ||||  |||    ||||||||||||| ||||||| |||  ||||||||       
         CTTC  GTT    TCTATAACTGCGC GAGTTAA TTT  TGTACCGA      
TCTACCTTT    AC   CTAC             C       T   AA        CCAAAA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Glyma.01G079500.1 1.0 NA 0 (3)
Glyma.16G031700.4 NA NA 0 (2)
Glyma.16G073300.1 NA NA 0 (1)
Glyma.01G042400.1 NA NA 2 (1)
Glyma.07G224200.1 NA NA 2 (1)
Glyma.08G067700.5 NA NA 2 (1)
Glyma.08G161600.1 NA NA 2 (2)
Glyma.09G256402.1 NA NA 2 (1)
Glyma.10G006200.1 NA NA 2 (2)
Glyma.12G117600.1 NA NA 2 (1)
Glyma.15G266100.1 NA NA 2 (2)
Glyma.20G024100.1 NA NA 2 (2)
Glyma.01G136300.1 1.0 NA NA
Glyma.03G031800.1 1.0 NA NA
Glyma.11G168219.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference