Gma-MIR171p

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
   AATTAGCACA  A    T          C    C       T  A      A  -   ATA
             TG CAAA TAAGGTATTG CGTG CTCAATC GA TACATG CT ATT   
             || |||| |||||||||| |||| ||||||| || |||||| || |||   A
             AC GTTT ATTCTATAAC GCGC GAGTTAG TT ATGTAC GA TAA   
TTACTTTTTCTTC  -    T          T    C       T  C      C  C   AAC

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Glyma.02G098000.1 NA NA 2 (1)
Glyma.06G318100.1 NA NA 2 (1)
Glyma.13G027800.1 NA NA 2 (1)
Glyma.01G079500.1 1.0 NA NA
Glyma.01G136300.1 1.0 NA NA
Glyma.03G031800.1 1.0 NA NA
Glyma.11G168219.1 1.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference