Gma-MIR171u

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
  GTTGGAGGAGTATGTGGG        A  A         A      -TT   T   G   GG
                    GATGTTGG AC GTTCAATCA ATCAAA   TCC AAT ATT  
                    |||||||| || ||||||||| ||||||   ||| ||| |||   
                    CTATAACC TG CGAGTTAGT TAGTTT   AGG TTG TAG  
TTAATACGATTCATCCTTAA        G  C         A      CTT   -   G   TG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

Glyma.02G241400.1 4.5 NA 2 (1)
Glyma.18G253400.5 5.0 NA 2 (1)
Glyma.09G087400.1 NA NA 2 (1)
Glyma.01G079500.1 0.5 NA NA
Glyma.01G136300.1 0.5 NA NA
Glyma.03G031800.1 0.5 NA NA
Glyma.11G168219.1 0.5 NA NA
Glyma.13G204500.1 1.0 NA NA
Glyma.15G108100.4 1.0 NA NA
Glyma.01G177200.1 2.0 NA NA
Glyma.11G065200.1 2.0 1 NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference