Gar-MIR171b

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
       AC  TAAAA    G        A               C   TTT   TGAGT
 GAGATG  GA     CTGG GATGTTGG ATGGCTCAATCAAAT AAA   CCT     
 ||||||  ||     |||| |||||||| ||||||||||||||| |||   |||     T
 CTCTAT  CT     GACC CTATAACC TGCCGAGTTAGTTTA TTT   GGG     
C      -A  --TTC    A        G               A   TCT   TTATT

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_017768217.1 0.5 NA NA
XM_017781711.1 0.5 NA NA
XM_017781712.1 0.5 NA NA
XM_017782901.1 0.5 NA NA
XM_017782902.1 0.5 NA NA
XM_017787403.1 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference