Gar-MIR171f

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
     T      A T     C         T       C     CA   AT    TT      TTT   TAT
   GG TGAAAT G CACTG GATGTTGGC CGGTTCA TCAGA  ATA  CAAG  CTACGC   AGA   
   || |||||| | ||||| ||||||||| ||||||| |||||  |||  ||||  ||||||   |||    
   CT ACTTTG C GTGAT CTATAACCG GCCGAGT AGTTT  TGT  GTTC  GATGCG   TCT   
TCT  T      C -     C         T       T     CG   -C    --      ---   CAA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_017768217.1 0.5 NA NA
XM_017781711.1 0.5 NA NA
XM_017781712.1 0.5 NA NA
XM_017782901.1 0.5 NA NA
XM_017782902.1 0.5 NA NA
XM_017787403.1 0.5 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference