Gar-MIR171h

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
     CAAA  T  T TAC   G             A          C   TCT     TG
         GG GG G   GAT GATGTTGGCACGG TCAATCGGAT AAA   CTCAG  
         || || |   ||| ||||||||||||| |||||||||| |||   |||||   
         TC CC C   CTA CTATAACCGTGCT AGTTAGTCTA TTT   GAGTC  
TACACACTC  T  - --T   A             G          A   CCT     AG

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_017768217.1 1.0 NA NA
XM_017781711.1 1.0 NA NA
XM_017781712.1 1.0 NA NA
XM_017782901.1 1.0 NA NA
XM_017782902.1 1.0 NA NA
XM_017787403.1 1.0 NA NA
XM_017770913.1 1.5 1 NA
XM_017790930.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference