Gba-MIR171

Basic info.

• miRNA locus ID
• Gba-MIR171

• miRNA locus accession
• PmiREN008914

• Organism
• Gossypium barbadense

• Genomic location
• Gba-KV851494.1  69472  69584  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATATTGAGTTGAGATTTTTA                      C    CT     T
                      TGTTGGTACGGTTCAGTCAGAT AAAT  CTCGG 
                      |||||||||||||||||||||| ||||  ||||| G
                      ATAACCGTGCTGAGTTAGTCTG TTTG  GAGTC 
GTCTATACCGCTCAGTTCCACT                      A    CT     G

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• Link To PNDB

Reference

• >Comparative expression of miRNA genes and miRNA-based AFLP marker analysis in cultivated tetraploid cottons. J Plant Physiol, 2011