Hbr-MIR171e

Basic info.

Secondary strurture and sequence

mature sequence    star sequence
5'



3'
 GTTTATAGAGAAA   -          A  G         A  C   TCT     GG
              GAG GGGATGTTGG AT GCTCAATCA AT AAA   CCCAA  
              ||| |||||||||| || ||||||||| || |||   |||||   
              TTC CCCTATAACC TG CGAGTTAGT TA TTT   GGGTT  
ATACTGTACATTTA   T          G  G         C  A   CCT     TA

miRNA cluster info.

No miRNA locus in ± 10k bp interval.

miRNA syntenic block

No syntenic block.

Expression info.

Mature miRNA expression [+]

Reads per million (RPM)

star miRNA expression [+]

Reads per million (RPM)

Target gene info.[+]

Target gene ID psRNAtarget RNAhybrid PARE-Seq?

The first number (from 0-2) indicates the category of CleaveLand4 analysis result while the number in brackets displays the number of degradome libraries which verify the miRNA-target interaction. Click the number to download the selected figure of PARE-Seq reads distribution.

XM_021833856.1 1.0 1 NA
XM_021833857.1 1.0 1 NA
XM_021792397.1 2.0 NA NA
XM_021811037.1 2.0 NA NA
XM_021811038.1 2.0 NA NA
XM_021811039.1 2.0 NA NA
XM_021822213.1 2.0 NA NA
XM_021830103.1 2.0 NA NA
XR_002497147.1 2.0 NA NA

Mature miRNA conservation

?

Mature miRNA conservation

    Link

    Reference