Hsy-MIR171a

Basic info.

• miRNA locus ID
• Hsy-MIR171a

• miRNA locus accession
• PmiREN009413

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01002000.1  12706  12821  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TACTTGAATCG     T            C         A  C    CT      AC
             AAAAT TGATGTTGGCAC GTTCAGTCA AT AAAT  CTCAAC  
             ||||| |||||||||||| ||||||||| || ||||  ||||||   
             TTTTA GCTATAACCGTG CGAGTTAGT TG TTTG  GAGTTG  
TTTGTTCATTTTG     C            C         C  A    TT      GT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference