Hsy-MIR171b

Basic info.

• miRNA locus ID
• Hsy-MIR171b

• miRNA locus accession
• PmiREN009414

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01002062.1  113405  113533  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  GGGAAGCAAAAGAAA     C          A         C  A  -  -GA     -  ATGG
                 GAAAG GATGTTGGTG GGTTCAATC GA GA CG   TTTAC GC    
                 ||||| |||||||||| ||||||||| || || ||   ||||| ||    A
                 CTTTC CTATAACCGC CCGAGTTAG CT CT GC   AAATG CG    
TTTAATCCTCCACACAC     A          G         A  -  A  ATA     T  GATT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference