Hsy-MIR171c

Basic info.

• miRNA locus ID
• Hsy-MIR171c

• miRNA locus accession
• PmiREN009415

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01003764.1  5997  6118  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ACAAAGGAAGAACGTCATCGA                    C  G     C     AAAA
                       GATATTGGTGCGGTTCAATT GA AGCAT ATTCT    
                       |||||||||||||||||||| || ||||| |||||     
                       CTATAACCGTGCCGAGTTAG CT TTGTA TGAGA    
ACATAGAGACCGTTACCAATGCA                    T  A     T     GGCG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference