Hsy-MIR171d

Basic info.

• miRNA locus ID
• Hsy-MIR171d

• miRNA locus accession
• PmiREN009416

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01003844.1  179849  179975  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TGGGAAG    ----------       A C          A         C  A  -          G  GAT
       CAAA          AAAGAAA G GATGTTGGTG GGTTCAATC GA GA CGGATTTACG AT   
       ||||          ||||||| | |||||||||| ||||||||| || || |||||||||| ||    
       GTTT          TTTCTTT C CTATAACCGC CCGAGTTAG CT CT GCTTAAATGC TG   
           AATCTTCTCA       - A          G         A  -  A          -  GCT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference