Hsy-MIR171e

Basic info.

• miRNA locus ID
• Hsy-MIR171e

• miRNA locus accession
• PmiREN009417

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01004006.1  118256  118377  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  CATACGGAAGAATGTCATCGA                    C  A     C      AAG
                       GATATTGGTGTGGTTCAATT GA AATAT GTTCTA   
                       |||||||||||||||||||| || ||||| ||||||    
                       CTATAACCGTGCCGAGTTAG CT TTGTA TAAGAT   
TTCATTTTCATATTACCGATGCA                    T  A     T      ACG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference