Hsy-MIR171h

Basic info.

• miRNA locus ID
• Hsy-MIR171h

• miRNA locus accession
• PmiREN009420

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01004181.1  89693  89820  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  TGGGAAGCAAAAAA      C          A         C  A  -       -   G  GAT
                GAAAAG GATGTTGGTG GGTTCAATC GA GA CGGATTT ACG AT   
                |||||| |||||||||| ||||||||| || || ||||||| ||| ||    
                CTTTTC CTATAACCGC CCGAGTTAG CT CT GCCTAAA TGC TG   
CTGATCTTCTCATTAC      A          G         A  -  A       A   -  GCT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference