Hsy-MIR171i

Basic info.

• miRNA locus ID
• Hsy-MIR171i

• miRNA locus accession
• PmiREN009421

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01004924.1  43295  43415  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

AAGAT    AT    ----AAT  A                       G   TT        G
     ACGA  GCAA       CG GATATTGGTATGGTTCAATCGGA AAC  GGCTCTAA 
     ||||  ||||       || ||||||||||||||||||||||| |||  |||||||| G
     TGCT  CGTT       GC CTATAACCGTGCCGAGTTAGTTT TTG  TTGAGATT 
TTTGG    --    AACACAC  A                       A   TT        A

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference