Hsy-MIR171n

Basic info.

• miRNA locus ID
• Hsy-MIR171n

• miRNA locus accession
• PmiREN009426

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01012342.1  1229  1351  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

          A   CTGA    -T   -        A           C   C    TT      GC
     GGATG TAT    AAAC  GGG GATGTTGG ATGGCTCAATC AGT AAAT  CCTGAA  
     ||||| |||    ||||  ||| |||||||| ||||||||||| ||| ||||  ||||||  T
     CCTAC ATA    TTTG  TCC CTATAACC TGCCGAGTTAG TTA TTTA  GGGTTT  
ACATA     -   ----    TT   A        G           T   A    CT      TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference