Hsy-MIR171q

Basic info.

• miRNA locus ID
• Hsy-MIR171q

• miRNA locus accession
• PmiREN009429

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01001731.1  349200  349313  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   CAAATC          T  C         C        A     --T C   TTAAT
         GGAGTATACA GG GTGATATTG TTCGGCTC TCTTT   C TCA     
         |||||||||| || ||||||||| |||||||| |||||   | |||      
         CTTTGTATGT CT CACTATAAC AAGCCGAG AGAAG   G AGT     
GGTAGTTTT          T  -         T        C     TTC A   CTAGC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference