Hsy-MIR171t

Basic info.

• miRNA locus ID
• Hsy-MIR171t

• miRNA locus accession
• PmiREN009432

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01007473.1  25414  25533  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

TGAC      T    A  TT         C       C      GTTAAAA    GCAT    TT
    ATGAAA AGTG CT  GATATTGGC TGGTTCA TCAGAC       CAAA    TTTC  
    |||||| |||| ||  ||||||||| ||||||| ||||||       ||||    ||||  T
    TACTTT TCAT GA  CTATAACCG GCCGAGT AGTCTG       GTTT    GAAG  
 ATA      C    -  TT         T       T      -------    --AT    TT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference