Hsy-MIR171u

Basic info.

• miRNA locus ID
• Hsy-MIR171u

• miRNA locus accession
• PmiREN009433

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01007539.1  51630  51737  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

    C      T   T   TT         C       C       T     ACAA
   A ATGAGA AGT ACT  GATATTGGC TGGTTCA TCAGACA GGAAA    
   | |||||| ||| |||  ||||||||| ||||||| ||||||| |||||     
   T TACTTT TCA TGA  CTATAACCG GCCGAGT AGTCTGT TTTTT    
CTC A      C   -   TT         T       T       T     ACCA

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference