Hsy-MIR171v

Basic info.

• miRNA locus ID
• Hsy-MIR171v

• miRNA locus accession
• PmiREN009434

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01008209.1  9166  9281  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   A           G   T  C         C        ATCTTTTC     --     CCA
    GGGAAGGAGTA ACA GG GTGATATTG TTCGGCTC        TCTCG  GTATT   
    ||||||||||| ||| || ||||||||| ||||||||        |||||  |||||   A
    TCTTTTTTCGT TGT CT CACTATAAC AAGCCGAG        AGAGC  CGTAA   
GTAA           A   T  -         T        -------C     TG     ACT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference