Hsy-MIR171w

Basic info.

• miRNA locus ID
• Hsy-MIR171w

• miRNA locus accession
• PmiREN009435

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01010957.1  5617  5732  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

          AAT     G   T  C         C        A    ---CTCTCTC   AA
      AGGA   GAGTA ACA GG GTGATATTG TTCGGCTC TCTT          GAT  
      ||||   ||||| ||| || ||||||||| |||||||| ||||          |||  T
      TTCT   TTCGT TGT CT CACTATAAC AAGCCGAG AGAA          CTG  
ATATTT    ---     A   T  -         T        C    CTTTGTAATC   CC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference