Hsy-MIR171x

Basic info.

• miRNA locus ID
• Hsy-MIR171x

• miRNA locus accession
• PmiREN009436

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01003285.1  104354  104506  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

      T G  -AAA     T  -      A   -     AGGAAGTAGTA   G    ---- CCTCCTTGAAGTAGAAAGCAG
 ATTCG G AC    GCGGG GA GTTGGT GCG TTCAA           ACT TAAG    G                     
 ||||| | ||    ||||| || |||||| ||| |||||           ||| ||||    |                     C
 TAGGC C TG    CGTTC CT TAACCG CGC GAGTT           GTC GAGA    A                     
T     - G  AACG     C  A      -   C     -------AGTA   -    GGGG CATCCATTTGGGAAGTAGTCT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference