Hsy-MIR171y

Basic info.

• miRNA locus ID
• Hsy-MIR171y

• miRNA locus accession
• PmiREN009437

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01004395.1  9534  9646  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   ACA     T    A  TC         C       C      GTGAAAAGG  TTT
      TGAAA AGTG CT  GATATTGGC TGGTTCG TCGGGC         CA   
      ||||| |||| ||  ||||||||| ||||||| ||||||         ||    
      ACTTT TCAT GA  CTATAACCG GCCGAGT AGTCTG         GT   
CTATAT     C    -  TT         T       T      -GTTATGAA  TTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference