Hsy-MIR171z

Basic info.

• miRNA locus ID
• Hsy-MIR171z

• miRNA locus accession
• PmiREN009438

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01003783.1  111725  111840  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

  ATCTTGAATCG     T                      A  C    CT     AAA
             AGAAT CGATGTTGGCACGGTTCAGTCA AT AAAT  CTCAA   
             ||||| |||||||||||||||||||||| || ||||  |||||    
             TTTTA GCTATAACCGTGCTGAGTTAGT TA TTTG  GAGTT   
TTTGTTCATATTG     C                      C  A    CT     GGT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference