Hsy-MIR171ad

Basic info.

• miRNA locus ID
• Hsy-MIR171ad

• miRNA locus accession
• PmiREN009442

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01001803.1  135392  135529  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   TGGT     T  T     C         T       C     CAAA  C  -TT   AA   TTT   CG
       TGAAA AG CACTG GATGTTGGC CGGTTCA TCAGA    AC GC   CAA  GAG   TTA  
       ||||| || ||||| ||||||||| ||||||| |||||    || ||   |||  |||   |||   
       ACTTT TC GTGAT CTATAACCG GCCGAGT AGTTT    TG CG   GTT  CTC   AAT  
AGTCTCT     T  -     C         T       T     --CG  T  TTC   -G   TTT   GT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference