Hsy-MIR171ag

Basic info.

• miRNA locus ID
• Hsy-MIR171ag

• miRNA locus accession
• PmiREN009445

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01002238.1  104092  104230  -

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   T  T     T    A  GC         T       C     CAAA     TTCAAAAA    TTT      TAA
    GG TGAAA AGTA CT  GATGTTGGC CGGTTCA TCAGA    ACAGC        GAGT   TACGTG   
    || ||||| |||| ||  ||||||||| ||||||| |||||    |||||        ||||   ||||||    
    TC ACTTT TCGT GA  CTATAACCG GCCGAGT AGTTT    TGTTG        TTCG   ATGCAC   
CTTC  T     T    -  GC         T       T     --CG     --------    ---      TTT

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference