Hsy-MIR171ai

Basic info.

• miRNA locus ID
• Hsy-MIR171ai

• miRNA locus accession
• PmiREN009447

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01004677.1  82710  82850  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

 GCATG   -T    ACTGT     C   - T   T  C      AT     AAAAGGCATT       -     AAG
      GAA  AGTA     GATAT GGC C GCT CA TCAGAC  GAAAC          TGTTGAT CTTTC   
      |||  ||||     ||||| ||| | ||| || ||||||  |||||          ||||||| |||||   A
      CTT  TCAT     CTATA CCG G CGA GT AGTCTG  TTTTG          GTAACTA GAAAG   
TCTATA   TC    GTATT     A   T C   -  T      -G     ----------       C     CTG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference