Hsy-MIR171ak

Basic info.

• miRNA locus ID
• Hsy-MIR171ak

• miRNA locus accession
• PmiREN009449

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01011841.1  2665  2778  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

   T  T     T  T   TGC         T       C     -  AAAAAAC  T  TCT
    GG TGAAA AG CAC   GATGTTGGC CGGTTCA TCAGA CA       CA GC   
    || ||||| || |||   ||||||||| ||||||| ||||| ||       || ||   G
    TC ACTTT TC GTG   CTATAACCG GCCGAGT AGTTT GT       GT CG   
CTTC  T     T  -   TTC         T       T     C  -------  -  TTC

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference