Hsy-MIR171an

Basic info.

• miRNA locus ID
• Hsy-MIR171an

• miRNA locus accession
• PmiREN009452

• Organism
• Hibiscus syriacus

• Genomic location
• Hsy-MBGJ01000019.1  159836  159964  +

• Comments
• A member of family MIR171

• Confidence level
• 

Secondary strurture and sequence

GGGAAGC   --    -------A     C          A         C  AGAC       CGCATGGATT
       AAA  AGAA        GAAAG GATGTTGGTG GGTTCAATC GA    GGATTTA          
       |||  ||||        ||||| |||||||||| ||||||||| ||    |||||||          C
       TTT  TCTT        CTTTC CTATAACCGC CCGAGTTAG CT    CTAGCAT          
          AA    CATTGCAC     A          G         A  ----       AAAATGTTGG

• Get mature sequence
• Get star sequence
• Get miRNA stem-loop seqence
• Get miRNA stem-loop ± 20bp
• Get dot-bracket miRNA secondary structure
• Get miRNA stem-loop ± 500bp
• Get miRNA Promoter

miRNA cluster info.

• Cluster ID: 
• Chromosome: 
• Cluster start: 
• Cluster end: 

miRNA syntenic block

Expression info.

Mature miRNA expression [+]

star miRNA expression [+]

Target gene info.[+]

Link

• No link
• No link

Reference

• No reference